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semantic resources
ALIENSPECIES
Alien Species Thesaurus (ALIENSPECIES)
SKOS
Last submission date September 13, 2023

General information

The Alien Species Thesaurus is an initiative to deal with the semantics about alien and invasive species. It has been developed and published by LifeWatch Italy, the Italian node of the e-science European infrastructure for biodiversity and ecosystem research (LifeWatch ERIC). It is developed on the basis of already existing glossaries created within the framework of international initiatives aimed at the study of alien and invasive species. The terms (or concepts) are shared very broadly by the scientific community, and their definitions derive from guidelines prepared by relevant international organizations, and only in few occasions by peer reviewed papers. The Thesaurus currently consists of 157 terms.
Initial created on May 18, 2020. For additional information, contact Ilaria Rosati (ilaria.rosati@cnr.it) and Angela Boggero (angela.boggero@cnr.it).

Categories and subjects

Eco
Biodiv
Env


Metrics

FAIR score
Beta

We could not collect the data from the fairness service

Submissions

Version
Modified Submitted
Actions

2.5

September 13, 2023

2.0

May 18, 2020

Identifiers

URI

https://kos.lifewatch.eu/thesauri/alienspecies/
https://kos.lifewatch.eu/thesauri/alienspecies/
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EcoPortal URI

http://ecoportal.lifewatch.eu/ontologies/ALIENSPECIES
http://ecoportal.lifewatch.eu/ontologies/ALIENSPECIES
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DOI

https://doi.org/10.48373/xb7h-dw52
https://doi.org/10.48373/xb7h-dw52

Visits

Views of ALIENSPECIES

No views available for ALIENSPECIES.

ID https://kos.lifewatch.eu/thesauri/alienspecies/c_1
https://kos.lifewatch.eu/thesauri/alienspecies/c_1
http://ecoportal.lifewatch.eu/ontologies/ALIENSPECIES/c_1
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Preferred name

Alien species

Synonyms
Non-native species
Introduced species
Exotic species
AS
Foreign species
Allochthonous species
Non-indigenous species
Definitions
A species, subspecies or lower taxon, introduced outside its natural past or present distribution; includes any part, gametes, seeds, eggs, or propagules of such species that might survive and subsequently reproduce.
In schemes
Type http://www.w3.org/2004/02/skos/core#Concept
Subject Author Type Created
No notes to display
ID http://www.w3.org/2004/02/skos/core#broader
http://www.w3.org/2004/02/skos/core#broader
http://ecoportal.lifewatch.eu/ontologies/ALIENSPECIES/broader
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Type http://www.w3.org/2002/07/owl#AnnotationProperty
Add ALIENSPECIES Web Widgets to your site
Jump To

Type a class name from ALIENSPECIES and jump to it in EcoPortal

  • Download the quick_jump.js file and put it on your server.
  • Copy the code below and paste it to your HTML page
  • Note: If you would like to use Quick Jump across multiple semantic resources
    • You can enter a comma-separated list of semantic resource ids
      var BP_ontology_id = "NCIt,SNOMEDCT";
    • You can set the variable to 'all' to search all semantic resources in EcoPortal:
      var BP_ontology_id = "all";
  • To include definitions in the Jump To drop-down, add the following variable in Javascript:
    var BP_include_definitions = true;
  • In the code that you just pasted, make sure to change the path to the quick_jump.js file to point to the location where you put the file (relative to your HTML file)
    • For example, if you put the quick_jump.js file in the same directory as your HTML file, this is the code you would use:
      <div id="bp_quick_jump"></div>
                  <script type="text/javascript">
                      var BP_ontology_id = "ALIENSPECIES";</script>
                  <script src="quick_jump.js" type="text/javascript" charset="utf-8"></script>
      

For more help visit NCBO Widget Wiki


Autocomplete

Fill your form fields with classes from ALIENSPECIES

Example 1 (start typing the class name to get its full URI)

Example 2 (get the ID for a class)

Example 3 (get the preferred name for a class)

  • Download the form_complete.js file and put it on your server.
  • In the header for the page where you want the form field, include the form_complete.js In the header for the page where you want the form field, include the
  • On your form, for the fields where you want to use the class-selection widget, specify the field's class in the following format: bp_form_complete-{ontology_id_list}-{value}
    • For example, bp_form_complete-NCIT-uri will use NCI Thesaurus (semantic resource id is NCIT) and will put the class URI in the field after the user selects the class from the pull-down list.
      • Note: In addition to single semantic resource ids, you can use a list:
        bp_form_complete-NCIT,NCBITAXON-uri
      • OR use 'all' to search across all EcoPortal semantic resources:
        bp_form_complete-all-uri
      • The autocomplete widget accesses semantic resource content from the latest version of the semantic resource.
    • You can use the following parameters to select which value will be placed into the user-visible input field:
  • In addition to the input element you defined, there are four hidden form elements that are created and then set when a user selects a class from the list. For example, if you create a field with this code:
      <input type="text" name="a" class="bp_form_complete-all-uri" size="100"/>
    The 'name' attribute is used to create the four following fields (note how the 'a' from the name attribute is appended to the id attribute):
    • <input type="hidden" id="a_bioportal_preferred_name">
    • <input type="hidden" id="a_bioportal_concept_id">
    • <input type="hidden" id="a_bioportal_ontology_id">
    • <input type="hidden" id="a_bioportal_full_id">
    • Additional parameters are documented on the NCBO Widget Wiki

    For more help visit NCBO Widget Wiki


    Visualization

    Display a visualization for a given class in ALIENSPECIES

    Copy the code below and paste it to your HTML page

    <iframe frameborder="0" src="/widgets/visualization?ontology=ALIENSPECIES&class=https%3A%2F%2Fkos.lifewatch.eu%2Fthesauri%2Falienspecies%2Fc_24ff49cf&apikey=YOUR_API_KEY"></iframe>
    

    For more help visit NCBO Widget Wiki


    Tree Widget

    Display a class tree with a search field for ALIENSPECIES

    • Loading...
    Copy the code below and paste it to your HTML page

    <link rel="stylesheet" type="text/css" href="/widgets/jquery.ncbo.tree.css">
      <script src="/widgets/jquery.ncbo.tree-2.0.2.js"></script>
      <div id="widget_tree"></div>
      var widget_tree = $("#widget_tree").NCBOTree({
        apikey: "YOUR_API_KEY",
        ontology: "ALIENSPECIES"
      });
    
    

    You can also view a detailed demonstration

    For more help visit NCBO Widget Wiki